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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911588.1_cds_XP_016461587.1_54892
CDS Infomation

[gene=LOC107784905] [db_xref=GeneID:107784905] [protein=indole-3-acetic acid-amido synthetase GH3.6-like] [protein_id=XP_016461587.1] [location=complement(join(77826..78412,78524..79455,79669..79988))] [gbkey=CDS]
Sequence

ATGGAAAGAAACGTAGCTAATGAGGCACCAAAGGCCACAATAATGGCGGAGGATTACAAG
AAGGATCTTGAGTTCATTGAAGAGGTGACTAGCAATGTTGATGAGGTCCAAATGAGAGTT
CTTGCTGAAATCCTCTCCCAGAATGCACATGTTGAGTACTTGCAACGCCATAATCTCAAT
GGCAGCACTGATAGAGAGACATTCAAGAAAGTCGTACCTGTCATCACTTATGAAGATATT
CAGCCTGATATCAAACGCATAGCCTATGGTGATAAATCTCCTATCCTCTGCTCCCAACCC
ATCTCTGAATTATTGTCAAGTTCTGGCACCTCTGGAGGGGAGAGCAAATTGATACCAACA
ACAGAGCCAGAGATTGGGAGGAGACTACAGCTTCACAAACTTGTGATGTCTGTGTTGAGC
CAAGTGGCTCCAGATTCTGGAAAGGGCAAAGGAATGTATTTCATGTTCATAAGCCCTGAA
CAAAAGACCCCAGGAGGATTAATAGCTCGCTTTCTTACAACTAGTTATTACAATAGTCCT
TACTTCAACTACAGTCGTCTTCATAACCCCCATTGTAACTACACTAGTCCAACTGCAGCC
ATTCTCTGCCCAGACTCTTACCAAAGCATGTATTCCCAAATGCTTTGTGGCCTCTGCCAA
AACAACCAAGTCCTCCGTGTTGGCTCCTTTTTTGCGACCAGCTTCGTTCGTGCCATCCGA
TTCCTGGAGAAGCACTGGTCTCTACTTTGTAACGATATCCGAAGCGGAACCATTAACACT
CAAATAACTGATCCTTTAGTGAGAGAGGCAGTGATGGAAGTCCTCAAACCTGACCCAACA
TTAGCTGATTTCATTGAGGTTGAATGCACCAAAGATTCATGGCAAGGGATCATCACTAGG
TTATGGCCTAATACCAAGTATGTGGATGCTATTGTGACTGGATCCATGTCACAATATATA
CCGATACTTGATTATTACAGCAACAATCTCCCTCTTATCAGTACTCTGTATGCTTCCTCG
GAAAGCCACTTTGGAATCAACTTGAACCCTTTTTGTAAGCCCAGTGATGTCTCTTACACC
CTTATTCCCACCATGTGCTATTTTGAGTTCTTACCGTATCGCGGAAACAGTGGAGTCATT
GATTCTATATCCATGCCCAAGTCGCTTAATGAGAAAGAACAACAACAATTGGTTGATTTG
GCTGATGTCAAGATTGGCCAGGAGTACGAGCTTGTTGTTACCACATATTCTGGACTCTAC
AGATATAGAGTCGGTGATGTGCTTCAGGTTGCTGGATACAAGAACAACGCGCCTCGATTC
AACTTCCTATGCCGGGAAAATGTAGTCTTGAGTATTGGTGCTGACTTCACTAATGAAGTT
GAGCTACAAAACGCAGTGAAAAATGCAGTGGGCAATCTGGTGCCATTTGATTCTCAGGTA
ACCGAGTACACCAGCTATGTCGATATTACCACCATTCCAAGCCACTATGTCATATTCTGG
GAACTGAATGCGAATGACTCTACCCTGGTTCCTCCTTCAGTCTTTGAAGATTGTTGCCTC
ACAATTGAAGAATCTCTTAACTACTTCTACCGCGAGGGCCGTGCGTCTAATGAATCCATC
GGGCCTCTAGAAATTAGGGTGTTGGAAATTGGAACTTTTGACAAGCTCATGGACTACTGC
ATGAGCTTAGGTGCTTCCATGAACCAATACAAGACGCCCCGCTGTTTGAAATATGCACCC
CTTATTGAGCTATTGAACTCTAGGGTCGTGTCCAGCTACTTCAGTCCCATGTGTCCAAAA
TGGGTTCCTGGCTACAAGAAATGGGACGGCAACAATTAA

Peptide Sequence

PEP ID

XP_016461587.1
PEP Infomation

PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Nicotiana tabacum]
Sequence

MERNVANEAPKATIMAEDYKKDLEFIEEVTSNVDEVQMRVLAEILSQNAHVEYLQRHNLN
GSTDRETFKKVVPVITYEDIQPDIKRIAYGDKSPILCSQPISELLSSSGTSGGESKLIPT
TEPEIGRRLQLHKLVMSVLSQVAPDSGKGKGMYFMFISPEQKTPGGLIARFLTTSYYNSP
YFNYSRLHNPHCNYTSPTAAILCPDSYQSMYSQMLCGLCQNNQVLRVGSFFATSFVRAIR
FLEKHWSLLCNDIRSGTINTQITDPLVREAVMEVLKPDPTLADFIEVECTKDSWQGIITR
LWPNTKYVDAIVTGSMSQYIPILDYYSNNLPLISTLYASSESHFGINLNPFCKPSDVSYT
LIPTMCYFEFLPYRGNSGVIDSISMPKSLNEKEQQQLVDLADVKIGQEYELVVTTYSGLY
RYRVGDVLQVAGYKNNAPRFNFLCRENVVLSIGADFTNEVELQNAVKNAVGNLVPFDSQV
TEYTSYVDITTIPSHYVIFWELNANDSTLVPPSVFEDCCLTIEESLNYFYREGRASNESI
GPLEIRVLEIGTFDKLMDYCMSLGASMNQYKTPRCLKYAPLIELLNSRVVSSYFSPMCPK
WVPGYKKWDGNN

Transcript Sequence

Gene sequence data has not been registered.